Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 AP000525.1-201ENST00000608286 694 ntBASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 AC004408.2-201ENST00000623613 2777 ntBASIC16.38■□□□□ 0.21
CLDND2Q8NHS1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 MIR1224-201ENST00000408193 85 ntBASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 TUBB8P6-201ENST00000436895 1288 ntBASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDND2Q8NHS1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 MIR1238-201ENST00000408483 83 ntBASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 AC116562.2-201ENST00000507042 360 ntBASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 KRT18P16-201ENST00000510337 1294 ntBASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDND2Q8NHS1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 AC026471.1-201ENST00000564629 3026 ntBASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDND2Q8NHS1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms