Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC096733.2-201ENST00000609937 1394 ntBASIC20.74■□□□□ 0.91
BEST2Q8NFU1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.74■□□□□ 0.91
BEST2Q8NFU1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 AC145285.6-201ENST00000604632 637 ntBASIC20.74■□□□□ 0.91
BEST2Q8NFU1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BEST2Q8NFU1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BEST2Q8NFU1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 RCN1P1-201ENST00000400413 996 ntBASIC20.72■□□□□ 0.91
BEST2Q8NFU1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 C2orf69P3-201ENST00000565542 1120 ntBASIC20.72■□□□□ 0.91
BEST2Q8NFU1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 CYP2D8P-201ENST00000433633 1490 ntBASIC20.72■□□□□ 0.91
BEST2Q8NFU1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 AC073130.3-201ENST00000624389 2278 ntBASIC20.72■□□□□ 0.91
BEST2Q8NFU1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BEST2Q8NFU1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.71■□□□□ 0.91
BEST2Q8NFU1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BEST2Q8NFU1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SDHAP1-207ENST00000440850 2000 ntBASIC20.7■□□□□ 0.9
BEST2Q8NFU1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
BEST2Q8NFU1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms