Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC168Q8NDH2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 PMS2P2-201ENST00000425039 1128 ntBASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 AP001160.2-201ENST00000596071 487 ntBASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC168Q8NDH2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 PGAM5P1-201ENST00000518923 814 ntBASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 KRT8P26-201ENST00000534154 1276 ntBASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC168Q8NDH2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 AC243591.1-201ENST00000452967 1364 ntBASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 PMS2P7-201ENST00000506558 1336 ntBASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC168Q8NDH2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 AC027601.4-201ENST00000611259 610 ntBASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 MIR4674-201ENST00000582457 87 ntBASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC168Q8NDH2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC168Q8NDH2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms