Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 AC023632.3-201ENST00000521633 145 ntBASIC18.82■□□□□ 0.6
CPSF7Q8N684 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 KRT18P29-201ENST00000397031 1267 ntBASIC18.81■□□□□ 0.6
CPSF7Q8N684 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 ITM2C-210ENST00000620962 501 ntBASIC18.81■□□□□ 0.6
CPSF7Q8N684 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPSF7Q8N684 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.81■□□□□ 0.6
CPSF7Q8N684 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
CPSF7Q8N684 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 AL390961.4-201ENST00000623958 2535 ntBASIC18.8■□□□□ 0.6
CPSF7Q8N684 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
CPSF7Q8N684 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPSF7Q8N684 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 AC066615.1-201ENST00000640911 628 ntBASIC18.79■□□□□ 0.6
CPSF7Q8N684 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms