Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DGCR10-201ENST00000609839 495 ntBASIC20.51■□□□□ 0.87
TTC39CQ8N584 AC130371.2-201ENST00000619443 611 ntBASIC20.51■□□□□ 0.87
TTC39CQ8N584 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TTC39CQ8N584 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC39CQ8N584 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 B3GAT3P1-201ENST00000471720 806 ntBASIC20.5■□□□□ 0.87
TTC39CQ8N584 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 AC026471.5-201ENST00000615068 467 ntBASIC20.5■□□□□ 0.87
TTC39CQ8N584 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 AC066615.1-201ENST00000640911 628 ntBASIC20.5■□□□□ 0.87
TTC39CQ8N584 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TTC39CQ8N584 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TTC39CQ8N584 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 AC011298.2-201ENST00000617989 482 ntBASIC20.49■□□□□ 0.87
TTC39CQ8N584 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TTC39CQ8N584 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC39CQ8N584 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 AC093827.2-201ENST00000512654 315 ntBASIC20.48■□□□□ 0.87
TTC39CQ8N584 PRSS44-201ENST00000515154 1146 ntBASIC20.48■□□□□ 0.87
TTC39CQ8N584 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 MIR4497-201ENST00000583208 89 ntBASIC20.48■□□□□ 0.87
TTC39CQ8N584 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TTC39CQ8N584 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TTC39CQ8N584 AL032819.2-201ENST00000624543 2162 ntBASIC20.48■□□□□ 0.87
TTC39CQ8N584 AC005332.7-201ENST00000614046 2005 ntBASIC20.48■□□□□ 0.87
TTC39CQ8N584 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 AC091390.4-202ENST00000476426 537 ntBASIC20.47■□□□□ 0.87
TTC39CQ8N584 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC39CQ8N584 AC141586.3-201ENST00000562166 1838 ntBASIC20.47■□□□□ 0.87
TTC39CQ8N584 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TTC39CQ8N584 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms