Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 YBX1P10-201ENST00000444752 975 ntBASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.67■□□□□ 0.9
CCDC170Q8IYT3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 AC004911.1-201ENST00000416316 871 ntBASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 BX276092.2-201ENST00000417668 665 ntBASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 RAP2CP1-201ENST00000605103 478 ntBASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 AP006587.1-201ENST00000534129 1502 ntBASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC170Q8IYT3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 AC026271.2-201ENST00000428091 497 ntBASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 RPS2P52-201ENST00000469610 820 ntBASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 AF201337.1-201ENST00000520239 748 ntBASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 BICD1-207ENST00000551848 1962 ntBASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC170Q8IYT3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms