Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DHX40Q8IX18 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DHX40Q8IX18 AL355802.2-201ENST00000402069 882 ntBASIC21.41■■□□□ 1.02
DHX40Q8IX18 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DHX40Q8IX18 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DHX40Q8IX18 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.41■■□□□ 1.02
DHX40Q8IX18 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DHX40Q8IX18 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 AC073210.2-201ENST00000430369 194 ntBASIC21.4■■□□□ 1.02
DHX40Q8IX18 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DHX40Q8IX18 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.4■■□□□ 1.02
DHX40Q8IX18 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.39■■□□□ 1.02
DHX40Q8IX18 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.39■■□□□ 1.02
DHX40Q8IX18 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DHX40Q8IX18 NOC2LP1-202ENST00000452600 2235 ntBASIC21.39■■□□□ 1.01
DHX40Q8IX18 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
DHX40Q8IX18 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DHX40Q8IX18 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.39■■□□□ 1.01
DHX40Q8IX18 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 AL121832.2-201ENST00000610979 668 ntBASIC21.39■■□□□ 1.01
DHX40Q8IX18 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.39■■□□□ 1.01
DHX40Q8IX18 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DHX40Q8IX18 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 AC083906.2-201ENST00000511578 360 ntBASIC21.38■■□□□ 1.01
DHX40Q8IX18 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 AC005829.2-201ENST00000571422 1056 ntBASIC21.38■■□□□ 1.01
DHX40Q8IX18 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.38■■□□□ 1.01
DHX40Q8IX18 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DHX40Q8IX18 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
DHX40Q8IX18 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DHX40Q8IX18 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms