Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM48Q8IWZ4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TRIM48Q8IWZ4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM48Q8IWZ4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 ECEL1P3-201ENST00000427961 737 ntBASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM48Q8IWZ4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 AC079598.2-202ENST00000546624 1451 ntBASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM48Q8IWZ4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 AC004951.3-201ENST00000418645 1148 ntBASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 AL160286.2-201ENST00000567150 934 ntBASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 DGCR10-201ENST00000609839 495 ntBASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 AC011298.2-201ENST00000617989 482 ntBASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM48Q8IWZ4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM48Q8IWZ4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms