Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 KRT17P3-201ENST00000420566 1262 ntBASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 AC026366.1-201ENST00000488803 879 ntBASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 AC069544.1-201ENST00000609399 999 ntBASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 AL020996.1-203ENST00000536896 2307 ntBASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 AC004264.1-201ENST00000608354 794 ntBASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 AC004408.2-201ENST00000623613 2777 ntBASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDKL3Q8IVW4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL3Q8IVW4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.77■□□□□ 0.75
CDKL3Q8IVW4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.77■□□□□ 0.75
CDKL3Q8IVW4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL3Q8IVW4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL3Q8IVW4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL3Q8IVW4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 AL049812.1-201ENST00000432563 2267 ntBASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms