Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KRT16P2-201ENST00000414673 1423 ntBASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CROCCP3Q8IVE0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.46■□□□□ 0.38
CROCCP3Q8IVE0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CROCCP3Q8IVE0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 AC126763.1-201ENST00000552015 2118 ntBASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 AC009237.14-201ENST00000609975 1594 ntBASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CROCCP3Q8IVE0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.44■□□□□ 0.38
CROCCP3Q8IVE0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 AC120498.10-201ENST00000621827 505 ntBASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 AC105233.4-201ENST00000642045 216 ntBASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CROCCP3Q8IVE0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms