Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM90A1Q86YD7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM90A1Q86YD7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM90A1Q86YD7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM90A1Q86YD7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 KRT16P1-201ENST00000399124 1418 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 AIRN-201ENST00000601203 4374 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 FAM197Y1-201ENST00000421178 764 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 AL160286.2-201ENST00000567150 934 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 CD177P1-201ENST00000606252 935 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 AC113410.3-201ENST00000623366 203 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 CR392000.1-201ENST00000624770 1228 ntBASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A1Q86YD7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 AC141586.3-201ENST00000562166 1838 ntBASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A1Q86YD7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A1Q86YD7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms