Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL354751.1-201ENST00000412768 1863 ntBASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 GPX1P1-201ENST00000388829 606 ntBASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM1Q86UE6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
LRRTM1Q86UE6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRTM1Q86UE6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.71■□□□□ 0.26
LRRTM1Q86UE6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRTM1Q86UE6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 AC093787.1-201ENST00000450396 207 ntBASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM1Q86UE6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms