Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 FP475955.4-201ENST00000623131 1990 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 GCSHP5-201ENST00000443090 522 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AF186192.3-201ENST00000583427 947 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 FEM1AP3-201ENST00000403722 1741 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 IRX1P1-201ENST00000438849 1838 ntBASIC16.59■□□□□ 0.25
COLCA1Q6ZS62 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 AP000974.1-201ENST00000623909 2387 ntBASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COLCA1Q6ZS62 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 RPS2P4-201ENST00000476944 856 ntBASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 AC142381.4-202ENST00000563973 229 ntBASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 FAM197Y4-202ENST00000622692 608 ntBASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 AC131212.4-201ENST00000623606 975 ntBASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
COLCA1Q6ZS62 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 AC098818.2-201ENST00000564925 2320 ntBASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 UBE2SP1-201ENST00000450587 669 ntBASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COLCA1Q6ZS62 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms