Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CD109Q6YHK3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC29.37■■■□□ 2.29
CD109Q6YHK3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CD109Q6YHK3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
CD109Q6YHK3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CD109Q6YHK3 FEM1AP4-201ENST00000443167 1987 ntBASIC29.37■■■□□ 2.29
CD109Q6YHK3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CD109Q6YHK3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CD109Q6YHK3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC29.37■■■□□ 2.29
CD109Q6YHK3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CD109Q6YHK3 AC138894.3-201ENST00000603787 634 ntBASIC29.37■■■□□ 2.29
CD109Q6YHK3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 AC036111.1-201ENST00000533973 1582 ntBASIC29.36■■■□□ 2.29
CD109Q6YHK3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CD109Q6YHK3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
CD109Q6YHK3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 GPAT2P1-201ENST00000444924 1672 ntBASIC29.35■■■□□ 2.29
CD109Q6YHK3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 AC006128.1-201ENST00000624704 1661 ntBASIC29.35■■■□□ 2.29
CD109Q6YHK3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CD109Q6YHK3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC29.35■■■□□ 2.29
CD109Q6YHK3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 SMG8-203ENST00000578922 2178 ntBASIC29.34■■■□□ 2.29
CD109Q6YHK3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CD109Q6YHK3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 AC104819.1-201ENST00000504587 486 ntBASIC29.34■■■□□ 2.29
CD109Q6YHK3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 AL157888.1-201ENST00000631930 593 ntBASIC29.34■■■□□ 2.29
CD109Q6YHK3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
CD109Q6YHK3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 AL391807.1-203ENST00000604392 2365 ntBASIC29.33■■■□□ 2.29
CD109Q6YHK3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC29.33■■■□□ 2.29
CD109Q6YHK3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CD109Q6YHK3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CD109Q6YHK3 IL9RP2-201ENST00000423948 1312 ntBASIC29.32■■■□□ 2.28
CD109Q6YHK3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CD109Q6YHK3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CD109Q6YHK3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 SLC25A1P1-201ENST00000528351 927 ntBASIC29.32■■■□□ 2.28
CD109Q6YHK3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.32■■■□□ 2.28
CD109Q6YHK3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CD109Q6YHK3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CD109Q6YHK3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CD109Q6YHK3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms