Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC62Q6P9F0 AC141257.4-201ENST00000634557 245 ntBASIC21.67■■□□□ 1.06
CCDC62Q6P9F0 AC136944.6-201ENST00000634818 245 ntBASIC21.67■■□□□ 1.06
CCDC62Q6P9F0 MYC-208ENST00000641036 567 ntBASIC21.67■■□□□ 1.06
CCDC62Q6P9F0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC62Q6P9F0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 RNF152P1-201ENST00000397754 604 ntBASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC62Q6P9F0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 COX11P1-201ENST00000489116 835 ntBASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 TCF3P1-201ENST00000423021 1937 ntBASIC21.65■■□□□ 1.06
CCDC62Q6P9F0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC62Q6P9F0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC62Q6P9F0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC62Q6P9F0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC62Q6P9F0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC62Q6P9F0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 TSPY5P-201ENST00000426936 936 ntBASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 AP003041.3-201ENST00000527151 707 ntBASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCDC62Q6P9F0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 PRSS44-201ENST00000515154 1146 ntBASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 AC011558.1-201ENST00000623459 338 ntBASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC62Q6P9F0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 AC104417.2-201ENST00000562989 1793 ntBASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC62Q6P9F0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms