Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VARS2Q5ST30 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARS2Q5ST30 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARS2Q5ST30 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VARS2Q5ST30 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VARS2Q5ST30 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.4■□□□□ 0.86
VARS2Q5ST30 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARS2Q5ST30 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.39■□□□□ 0.86
VARS2Q5ST30 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARS2Q5ST30 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.39■□□□□ 0.86
VARS2Q5ST30 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARS2Q5ST30 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VARS2Q5ST30 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
VARS2Q5ST30 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.39■□□□□ 0.86
VARS2Q5ST30 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.39■□□□□ 0.86
VARS2Q5ST30 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 AP003041.3-201ENST00000527151 707 ntBASIC20.39■□□□□ 0.85
VARS2Q5ST30 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 AC139887.4-201ENST00000607877 719 ntBASIC20.39■□□□□ 0.85
VARS2Q5ST30 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VARS2Q5ST30 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VARS2Q5ST30 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
VARS2Q5ST30 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VARS2Q5ST30 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 AC141257.4-201ENST00000634557 245 ntBASIC20.37■□□□□ 0.85
VARS2Q5ST30 AC136944.6-201ENST00000634818 245 ntBASIC20.37■□□□□ 0.85
VARS2Q5ST30 SDHAP1-207ENST00000440850 2000 ntBASIC20.37■□□□□ 0.85
VARS2Q5ST30 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VARS2Q5ST30 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.37■□□□□ 0.85
VARS2Q5ST30 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms