Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.72■□□□□ 0.59
SGO1Q5FBB7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 LINC01465-201ENST00000408887 1940 ntBASIC18.71■□□□□ 0.59
SGO1Q5FBB7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SGO1Q5FBB7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.71■□□□□ 0.58
SGO1Q5FBB7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SGO1Q5FBB7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 YBX1P10-201ENST00000444752 975 ntBASIC18.7■□□□□ 0.58
SGO1Q5FBB7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.7■□□□□ 0.58
SGO1Q5FBB7 TEX21P-204ENST00000641479 1693 ntBASIC18.69■□□□□ 0.58
SGO1Q5FBB7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 UNC93B4-201ENST00000505679 747 ntBASIC18.69■□□□□ 0.58
SGO1Q5FBB7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 HTR7P1-202ENST00000624664 4411 ntBASIC18.69■□□□□ 0.58
SGO1Q5FBB7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.69■□□□□ 0.58
SGO1Q5FBB7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms