Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.92■□□□□ 0.46
RFX4Q33E94 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.92■□□□□ 0.46
RFX4Q33E94 CYP2T3P-201ENST00000601990 817 ntBASIC17.92■□□□□ 0.46
RFX4Q33E94 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RFX4Q33E94 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RFX4Q33E94 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RFX4Q33E94 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 NOC2LP2-201ENST00000407594 1944 ntBASIC17.92■□□□□ 0.46
RFX4Q33E94 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 NOC2LP1-202ENST00000452600 2235 ntBASIC17.91■□□□□ 0.46
RFX4Q33E94 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.91■□□□□ 0.46
RFX4Q33E94 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.91■□□□□ 0.46
RFX4Q33E94 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 AC011767.1-201ENST00000617410 1153 ntBASIC17.91■□□□□ 0.46
RFX4Q33E94 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX4Q33E94 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFX4Q33E94 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX4Q33E94 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX4Q33E94 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.9■□□□□ 0.46
RFX4Q33E94 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.9■□□□□ 0.46
RFX4Q33E94 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.9■□□□□ 0.46
RFX4Q33E94 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 AC069236.1-201ENST00000604339 616 ntBASIC17.9■□□□□ 0.46
RFX4Q33E94 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RFX4Q33E94 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX4Q33E94 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX4Q33E94 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX4Q33E94 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX4Q33E94 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
RFX4Q33E94 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX4Q33E94 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX4Q33E94 AC006015.1-201ENST00000429970 570 ntBASIC17.89■□□□□ 0.45
RFX4Q33E94 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX4Q33E94 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.89■□□□□ 0.45
RFX4Q33E94 AC008694.1-202ENST00000636953 945 ntBASIC17.89■□□□□ 0.45
RFX4Q33E94 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX4Q33E94 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX4Q33E94 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX4Q33E94 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX4Q33E94 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX4Q33E94 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms