Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL353719.1-201ENST00000566847 864 ntBASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 AC008622.2-201ENST00000617006 1229 ntBASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTC1Q2NKJ3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 AC121338.2-201ENST00000622535 1744 ntBASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 AL359075.1-203ENST00000462729 1002 ntBASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 PRSS44-201ENST00000515154 1146 ntBASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 AC069148.1-201ENST00000608741 768 ntBASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTC1Q2NKJ3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 AC018553.1-201ENST00000616682 1458 ntBASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 AC006128.1-201ENST00000624704 1661 ntBASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTC1Q2NKJ3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 AL691432.3-201ENST00000621860 400 ntBASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.59■□□□□ 0.89
CTC1Q2NKJ3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 AL136038.3-201ENST00000561909 1096 ntBASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 AC140113.3-201ENST00000605663 199 ntBASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTC1Q2NKJ3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CTC1Q2NKJ3 PLK5-205ENST00000642079 1969 ntBASIC20.57■□□□□ 0.88
CTC1Q2NKJ3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.57■□□□□ 0.88
CTC1Q2NKJ3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTC1Q2NKJ3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
CTC1Q2NKJ3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTC1Q2NKJ3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms