Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 CA15P1-201ENST00000481698 905 ntBASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHROOM1Q2M3G4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.52■■□□□ 1.19
SHROOM1Q2M3G4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SHROOM1Q2M3G4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 AL359075.1-203ENST00000462729 1002 ntBASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SHROOM1Q2M3G4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 ZNF815P-204ENST00000434898 1737 ntBASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHROOM1Q2M3G4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHROOM1Q2M3G4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 TSPY23P-201ENST00000440136 739 ntBASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.48■■□□□ 1.19
SHROOM1Q2M3G4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms