Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL691432.2-201ENST00000607222 2038 ntBASIC16.94■□□□□ 0.3
NKX6-1P78426 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
NKX6-1P78426 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NKX6-1P78426 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.94■□□□□ 0.3
NKX6-1P78426 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 TERF1P1-201ENST00000311003 1181 ntBASIC16.94■□□□□ 0.3
NKX6-1P78426 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.94■□□□□ 0.3
NKX6-1P78426 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.94■□□□□ 0.3
NKX6-1P78426 YBX1P10-201ENST00000444752 975 ntBASIC16.94■□□□□ 0.3
NKX6-1P78426 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
NKX6-1P78426 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.94■□□□□ 0.3
NKX6-1P78426 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.94■□□□□ 0.3
NKX6-1P78426 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.94■□□□□ 0.3
NKX6-1P78426 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
NKX6-1P78426 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.94■□□□□ 0.3
NKX6-1P78426 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.94■□□□□ 0.3
NKX6-1P78426 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX6-1P78426 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NKX6-1P78426 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX6-1P78426 AC087388.1-201ENST00000571370 1112 ntBASIC16.93■□□□□ 0.3
NKX6-1P78426 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.93■□□□□ 0.3
NKX6-1P78426 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.93■□□□□ 0.3
NKX6-1P78426 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NKX6-1P78426 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX6-1P78426 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX6-1P78426 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX6-1P78426 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NKX6-1P78426 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
NKX6-1P78426 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-1P78426 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NKX6-1P78426 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-1P78426 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NKX6-1P78426 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX6-1P78426 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-1P78426 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-1P78426 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX6-1P78426 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX6-1P78426 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-1P78426 NTF6B-201ENST00000591913 560 ntBASIC16.92■□□□□ 0.3
NKX6-1P78426 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NKX6-1P78426 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX6-1P78426 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX6-1P78426 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX6-1P78426 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
NKX6-1P78426 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.91■□□□□ 0.3
NKX6-1P78426 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-1P78426 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX6-1P78426 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX6-1P78426 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NKX6-1P78426 AL390955.1-201ENST00000428694 934 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 SLC25A3P1-201ENST00000443844 931 ntBASIC16.91■□□□□ 0.3
NKX6-1P78426 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms