Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.85□□□□□ -0.03
SNRPEP62304 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.85□□□□□ -0.03
SNRPEP62304 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SNRPEP62304 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SNRPEP62304 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 LINC01971-201ENST00000617888 1048 ntBASIC14.85□□□□□ -0.03
SNRPEP62304 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.85□□□□□ -0.03
SNRPEP62304 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNRPEP62304 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.85□□□□□ -0.03
SNRPEP62304 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.84□□□□□ -0.03
SNRPEP62304 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNRPEP62304 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SNRPEP62304 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SNRPEP62304 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SNRPEP62304 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.83□□□□□ -0.03
SNRPEP62304 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNRPEP62304 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.83□□□□□ -0.03
SNRPEP62304 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 AC004448.1-201ENST00000458332 883 ntBASIC14.83□□□□□ -0.04
SNRPEP62304 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.83□□□□□ -0.04
SNRPEP62304 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.83□□□□□ -0.04
SNRPEP62304 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.83□□□□□ -0.04
SNRPEP62304 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNRPEP62304 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.83□□□□□ -0.04
SNRPEP62304 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms