Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RAB5BP61020 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB5BP61020 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB5BP61020 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB5BP61020 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB5BP61020 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5BP61020 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB5BP61020 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAB5BP61020 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB5BP61020 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB5BP61020 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB5BP61020 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAB5BP61020 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5BP61020 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5BP61020 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB5BP61020 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB5BP61020 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB5BP61020 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RAB5BP61020 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB5BP61020 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB5BP61020 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB5BP61020 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5BP61020 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5BP61020 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB5BP61020 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB5BP61020 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5BP61020 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5BP61020 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB5BP61020 AC068587.6-202ENST00000641839 5619 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms