Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GBX2P52951 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GBX2P52951 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.15■□□□□ 0.34
GBX2P52951 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 CNN2P6-201ENST00000439038 900 ntBASIC17.15■□□□□ 0.34
GBX2P52951 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.15■□□□□ 0.34
GBX2P52951 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GBX2P52951 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.15■□□□□ 0.34
GBX2P52951 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GBX2P52951 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.15■□□□□ 0.34
GBX2P52951 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GBX2P52951 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.15■□□□□ 0.34
GBX2P52951 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
GBX2P52951 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
GBX2P52951 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GBX2P52951 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 ZNF815P-204ENST00000434898 1737 ntBASIC17.14■□□□□ 0.33
GBX2P52951 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.14■□□□□ 0.33
GBX2P52951 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.14■□□□□ 0.33
GBX2P52951 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 DUX4L16-201ENST00000555130 1264 ntBASIC17.14■□□□□ 0.33
GBX2P52951 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GBX2P52951 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GBX2P52951 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GBX2P52951 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.14■□□□□ 0.33
GBX2P52951 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GBX2P52951 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
GBX2P52951 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.13■□□□□ 0.33
GBX2P52951 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 ZNRF2P3-201ENST00000424200 374 ntBASIC17.13■□□□□ 0.33
GBX2P52951 CYP2T1P-201ENST00000432607 1285 ntBASIC17.13■□□□□ 0.33
GBX2P52951 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.13■□□□□ 0.33
GBX2P52951 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.13■□□□□ 0.33
GBX2P52951 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GBX2P52951 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms