Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.71■□□□□ 0.59
PDX1P52945 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
PDX1P52945 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PDX1P52945 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
PDX1P52945 AC117947.1-201ENST00000427448 529 ntBASIC18.71■□□□□ 0.59
PDX1P52945 MFAP1P1-201ENST00000442257 1255 ntBASIC18.71■□□□□ 0.59
PDX1P52945 AC063952.2-201ENST00000498792 1227 ntBASIC18.71■□□□□ 0.59
PDX1P52945 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDX1P52945 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.71■□□□□ 0.59
PDX1P52945 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDX1P52945 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
PDX1P52945 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.7■□□□□ 0.58
PDX1P52945 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDX1P52945 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.7■□□□□ 0.58
PDX1P52945 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PDX1P52945 AK4P3-201ENST00000418260 669 ntBASIC18.7■□□□□ 0.58
PDX1P52945 BX664615.1-201ENST00000443558 458 ntBASIC18.7■□□□□ 0.58
PDX1P52945 Z85996.1-201ENST00000494644 937 ntBASIC18.7■□□□□ 0.58
PDX1P52945 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.7■□□□□ 0.58
PDX1P52945 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.7■□□□□ 0.58
PDX1P52945 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.7■□□□□ 0.58
PDX1P52945 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PDX1P52945 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.7■□□□□ 0.58
PDX1P52945 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 AL138966.2-201ENST00000621997 464 ntBASIC18.7■□□□□ 0.58
PDX1P52945 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.7■□□□□ 0.58
PDX1P52945 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDX1P52945 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.7■□□□□ 0.58
PDX1P52945 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.7■□□□□ 0.58
PDX1P52945 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.69■□□□□ 0.58
PDX1P52945 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
PDX1P52945 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 HMGA1P5-201ENST00000412453 271 ntBASIC18.69■□□□□ 0.58
PDX1P52945 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.69■□□□□ 0.58
PDX1P52945 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PDX1P52945 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 MYC-208ENST00000641036 567 ntBASIC18.69■□□□□ 0.58
PDX1P52945 TMEM179-206ENST00000616017 1645 ntBASIC18.69■□□□□ 0.58
PDX1P52945 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
PDX1P52945 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDX1P52945 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDX1P52945 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDX1P52945 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDX1P52945 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.68■□□□□ 0.58
PDX1P52945 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.68■□□□□ 0.58
PDX1P52945 FAM207BP-201ENST00000447172 505 ntBASIC18.68■□□□□ 0.58
PDX1P52945 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDX1P52945 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.68■□□□□ 0.58
PDX1P52945 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.68■□□□□ 0.58
PDX1P52945 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.68■□□□□ 0.58
PDX1P52945 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
PDX1P52945 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms