Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KNTC1P50748 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.31■□□□□ 0.52
KNTC1P50748 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KNTC1P50748 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KNTC1P50748 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KNTC1P50748 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KNTC1P50748 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KNTC1P50748 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
KNTC1P50748 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 SPDYE13P-201ENST00000445314 798 ntBASIC18.3■□□□□ 0.52
KNTC1P50748 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KNTC1P50748 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KNTC1P50748 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 AL391422.3-201ENST00000603791 2761 ntBASIC18.3■□□□□ 0.52
KNTC1P50748 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KNTC1P50748 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KNTC1P50748 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
KNTC1P50748 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.3■□□□□ 0.52
KNTC1P50748 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KNTC1P50748 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.3■□□□□ 0.52
KNTC1P50748 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
KNTC1P50748 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KNTC1P50748 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KNTC1P50748 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.29■□□□□ 0.52
KNTC1P50748 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.29■□□□□ 0.52
KNTC1P50748 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
KNTC1P50748 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 AC009078.2-202ENST00000463353 338 ntBASIC18.29■□□□□ 0.52
KNTC1P50748 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
KNTC1P50748 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.29■□□□□ 0.52
KNTC1P50748 AP001271.2-201ENST00000624018 1556 ntBASIC18.29■□□□□ 0.52
KNTC1P50748 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.29■□□□□ 0.52
KNTC1P50748 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KNTC1P50748 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KNTC1P50748 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 AC016734.2-201ENST00000624325 1377 ntBASIC18.28■□□□□ 0.52
KNTC1P50748 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KNTC1P50748 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 EMBP1-201ENST00000458200 901 ntBASIC18.28■□□□□ 0.52
KNTC1P50748 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KNTC1P50748 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.28■□□□□ 0.52
KNTC1P50748 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KNTC1P50748 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KNTC1P50748 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.28■□□□□ 0.52
KNTC1P50748 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KNTC1P50748 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.28■□□□□ 0.52
KNTC1P50748 AC004870.1-201ENST00000315132 882 ntBASIC18.27■□□□□ 0.52
KNTC1P50748 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
KNTC1P50748 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 FAAHP1-202ENST00000446499 1238 ntBASIC18.27■□□□□ 0.52
KNTC1P50748 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.27■□□□□ 0.52
KNTC1P50748 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.27■□□□□ 0.52
KNTC1P50748 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
KNTC1P50748 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KNTC1P50748 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KNTC1P50748 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
KNTC1P50748 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 PVRIG2P-201ENST00000435460 978 ntBASIC18.27■□□□□ 0.52
KNTC1P50748 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.27■□□□□ 0.52
KNTC1P50748 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KNTC1P50748 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.27■□□□□ 0.52
KNTC1P50748 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KNTC1P50748 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KNTC1P50748 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms