Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PCP4P48539 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PCP4P48539 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.34□□□□□ -0.27
PCP4P48539 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.34□□□□□ -0.27
PCP4P48539 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.34□□□□□ -0.27
PCP4P48539 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PCP4P48539 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC13.33□□□□□ -0.27
PCP4P48539 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PCP4P48539 AC132872.4-202ENST00000622924 2756 ntBASIC13.33□□□□□ -0.27
PCP4P48539 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PCP4P48539 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PCP4P48539 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PCP4P48539 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.33□□□□□ -0.28
PCP4P48539 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PCP4P48539 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.33□□□□□ -0.28
PCP4P48539 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.33□□□□□ -0.28
PCP4P48539 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PCP4P48539 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PCP4P48539 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PCP4P48539 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.32□□□□□ -0.28
PCP4P48539 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms