Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CHRNA4P43681 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA4P43681 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA4P43681 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHRNA4P43681 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRNA4P43681 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA4P43681 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHRNA4P43681 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRNA4P43681 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.44■□□□□ 0.7
CHRNA4P43681 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA4P43681 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA4P43681 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA4P43681 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA4P43681 AL049812.1-201ENST00000432563 2267 ntBASIC19.44■□□□□ 0.7
CHRNA4P43681 AC141586.3-201ENST00000562166 1838 ntBASIC19.44■□□□□ 0.7
CHRNA4P43681 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA4P43681 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA4P43681 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CHRNA4P43681 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHRNA4P43681 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA4P43681 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNA4P43681 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA4P43681 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA4P43681 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA4P43681 AC018445.3-201ENST00000624177 1945 ntBASIC19.43■□□□□ 0.7
CHRNA4P43681 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHRNA4P43681 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CHRNA4P43681 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA4P43681 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA4P43681 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHRNA4P43681 RPS2P4-201ENST00000476944 856 ntBASIC19.42■□□□□ 0.7
CHRNA4P43681 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.42■□□□□ 0.7
CHRNA4P43681 AL160286.2-201ENST00000567150 934 ntBASIC19.42■□□□□ 0.7
CHRNA4P43681 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNA4P43681 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRNA4P43681 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CHRNA4P43681 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHRNA4P43681 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNA4P43681 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.41■□□□□ 0.7
CHRNA4P43681 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 NIFKP9-201ENST00000419265 221 ntBASIC19.41■□□□□ 0.7
CHRNA4P43681 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRNA4P43681 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.41■□□□□ 0.7
CHRNA4P43681 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNA4P43681 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHRNA4P43681 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA4P43681 AL161938.1-201ENST00000569833 2180 ntBASIC19.41■□□□□ 0.7
CHRNA4P43681 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.41■□□□□ 0.7
CHRNA4P43681 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms