Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.46■□□□□ 0.87
SSR1P43307 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.45■□□□□ 0.86
SSR1P43307 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SSR1P43307 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.45■□□□□ 0.86
SSR1P43307 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.45■□□□□ 0.86
SSR1P43307 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.45■□□□□ 0.86
SSR1P43307 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SSR1P43307 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.45■□□□□ 0.86
SSR1P43307 PKD1P1-201ENST00000458669 6805 ntBASIC20.45■□□□□ 0.86
SSR1P43307 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SSR1P43307 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR1P43307 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SSR1P43307 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.44■□□□□ 0.86
SSR1P43307 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSR1P43307 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.44■□□□□ 0.86
SSR1P43307 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 AL121906.2-201ENST00000621597 723 ntBASIC20.44■□□□□ 0.86
SSR1P43307 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.44■□□□□ 0.86
SSR1P43307 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.44■□□□□ 0.86
SSR1P43307 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SSR1P43307 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSR1P43307 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSR1P43307 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.44■□□□□ 0.86
SSR1P43307 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 AP006587.1-201ENST00000534129 1502 ntBASIC20.43■□□□□ 0.86
SSR1P43307 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SSR1P43307 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.43■□□□□ 0.86
SSR1P43307 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.43■□□□□ 0.86
SSR1P43307 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.43■□□□□ 0.86
SSR1P43307 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.43■□□□□ 0.86
SSR1P43307 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.43■□□□□ 0.86
SSR1P43307 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
SSR1P43307 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR1P43307 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR1P43307 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SSR1P43307 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR1P43307 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR1P43307 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.42■□□□□ 0.86
SSR1P43307 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
SSR1P43307 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSR1P43307 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.42■□□□□ 0.86
SSR1P43307 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SSR1P43307 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
SSR1P43307 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.42■□□□□ 0.86
SSR1P43307 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.42■□□□□ 0.86
SSR1P43307 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms