Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GDNFP39905 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDNFP39905 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GDNFP39905 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GDNFP39905 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GDNFP39905 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDNFP39905 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GDNFP39905 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 NOC2LP2-201ENST00000407594 1944 ntBASIC16.76■□□□□ 0.27
GDNFP39905 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 NOC2LP1-202ENST00000452600 2235 ntBASIC16.76■□□□□ 0.27
GDNFP39905 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.76■□□□□ 0.27
GDNFP39905 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.76■□□□□ 0.27
GDNFP39905 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 AC005181.1-201ENST00000604782 1256 ntBASIC16.76■□□□□ 0.27
GDNFP39905 AC092666.2-201ENST00000613287 246 ntBASIC16.76■□□□□ 0.27
GDNFP39905 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 AL050303.2-201ENST00000619798 666 ntBASIC16.76■□□□□ 0.27
GDNFP39905 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 BICD1-207ENST00000551848 1962 ntBASIC16.76■□□□□ 0.27
GDNFP39905 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
GDNFP39905 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.76■□□□□ 0.27
GDNFP39905 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDNFP39905 AL354751.1-201ENST00000412768 1863 ntBASIC16.76■□□□□ 0.27
GDNFP39905 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.75■□□□□ 0.27
GDNFP39905 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.75■□□□□ 0.27
GDNFP39905 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GDNFP39905 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.75■□□□□ 0.27
GDNFP39905 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GDNFP39905 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GDNFP39905 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.74■□□□□ 0.27
GDNFP39905 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GDNFP39905 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.74■□□□□ 0.27
GDNFP39905 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 AC093787.1-201ENST00000450396 207 ntBASIC16.74■□□□□ 0.27
GDNFP39905 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.74■□□□□ 0.27
GDNFP39905 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GDNFP39905 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.74■□□□□ 0.27
GDNFP39905 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.74■□□□□ 0.27
GDNFP39905 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
GDNFP39905 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GDNFP39905 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GDNFP39905 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GDNFP39905 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms