Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLP35914 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 RCC2P6-201ENST00000526625 1557 ntBASIC19.2■□□□□ 0.66
HMGCLP35914 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGCLP35914 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLP35914 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HMGCLP35914 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 NUDT16P1-203ENST00000513809 620 ntBASIC19.2■□□□□ 0.66
HMGCLP35914 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.2■□□□□ 0.66
HMGCLP35914 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGCLP35914 TEX21P-204ENST00000641479 1693 ntBASIC19.2■□□□□ 0.66
HMGCLP35914 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HMGCLP35914 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HMGCLP35914 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGCLP35914 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLP35914 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HMGCLP35914 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMGCLP35914 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGCLP35914 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.19■□□□□ 0.66
HMGCLP35914 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGCLP35914 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGCLP35914 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 AC116562.2-201ENST00000507042 360 ntBASIC19.19■□□□□ 0.66
HMGCLP35914 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.19■□□□□ 0.66
HMGCLP35914 MIR6786-201ENST00000616843 113 ntBASIC19.19■□□□□ 0.66
HMGCLP35914 AC130371.2-201ENST00000619443 611 ntBASIC19.19■□□□□ 0.66
HMGCLP35914 AC066615.1-201ENST00000640911 628 ntBASIC19.19■□□□□ 0.66
HMGCLP35914 FSCN1P1-201ENST00000568912 1481 ntBASIC19.19■□□□□ 0.66
HMGCLP35914 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGCLP35914 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLP35914 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLP35914 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HMGCLP35914 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGCLP35914 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLP35914 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HMGCLP35914 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
HMGCLP35914 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLP35914 TSPY21P-201ENST00000433481 731 ntBASIC19.18■□□□□ 0.66
HMGCLP35914 B3GAT3P1-201ENST00000471720 806 ntBASIC19.18■□□□□ 0.66
HMGCLP35914 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLP35914 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGCLP35914 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGCLP35914 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLP35914 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLP35914 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLP35914 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGCLP35914 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HMGCLP35914 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 MESTP1-201ENST00000404287 994 ntBASIC19.17■□□□□ 0.66
HMGCLP35914 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.17■□□□□ 0.66
HMGCLP35914 AC011506.1-201ENST00000474329 610 ntBASIC19.17■□□□□ 0.66
HMGCLP35914 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.17■□□□□ 0.66
HMGCLP35914 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLP35914 AC026471.5-201ENST00000615068 467 ntBASIC19.17■□□□□ 0.66
HMGCLP35914 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLP35914 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLP35914 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms