Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PDE6BP35913 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PDE6BP35913 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PDE6BP35913 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 KRT17P6-201ENST00000453795 1220 ntBASIC23.77■■□□□ 1.4
PDE6BP35913 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.77■■□□□ 1.4
PDE6BP35913 MIR3180-1-201ENST00000580374 94 ntBASIC23.77■■□□□ 1.4
PDE6BP35913 MIR3180-3-201ENST00000584616 94 ntBASIC23.77■■□□□ 1.4
PDE6BP35913 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.77■■□□□ 1.4
PDE6BP35913 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.77■■□□□ 1.4
PDE6BP35913 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PDE6BP35913 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.77■■□□□ 1.4
PDE6BP35913 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDE6BP35913 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.77■■□□□ 1.4
PDE6BP35913 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.76■■□□□ 1.39
PDE6BP35913 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PDE6BP35913 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
PDE6BP35913 AC026310.3-201ENST00000625186 2373 ntBASIC23.76■■□□□ 1.39
PDE6BP35913 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.76■■□□□ 1.39
PDE6BP35913 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.76■■□□□ 1.39
PDE6BP35913 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDE6BP35913 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.76■■□□□ 1.39
PDE6BP35913 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.75■■□□□ 1.39
PDE6BP35913 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.75■■□□□ 1.39
PDE6BP35913 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.75■■□□□ 1.39
PDE6BP35913 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.75■■□□□ 1.39
PDE6BP35913 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.75■■□□□ 1.39
PDE6BP35913 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.75■■□□□ 1.39
PDE6BP35913 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDE6BP35913 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PDE6BP35913 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PDE6BP35913 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PDE6BP35913 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDE6BP35913 AC009237.14-201ENST00000609975 1594 ntBASIC23.74■■□□□ 1.39
PDE6BP35913 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
PDE6BP35913 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE6BP35913 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE6BP35913 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.74■■□□□ 1.39
PDE6BP35913 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE6BP35913 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PDE6BP35913 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.74■■□□□ 1.39
PDE6BP35913 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.74■■□□□ 1.39
PDE6BP35913 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.74■■□□□ 1.39
PDE6BP35913 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.74■■□□□ 1.39
PDE6BP35913 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.74■■□□□ 1.39
PDE6BP35913 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
PDE6BP35913 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE6BP35913 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PDE6BP35913 KRT8P10-201ENST00000450021 1447 ntBASIC23.74■■□□□ 1.39
PDE6BP35913 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
PDE6BP35913 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDE6BP35913 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.73■■□□□ 1.39
PDE6BP35913 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.73■■□□□ 1.39
PDE6BP35913 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
PDE6BP35913 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PDE6BP35913 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PDE6BP35913 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.73■■□□□ 1.39
PDE6BP35913 UNC93B7-201ENST00000509439 705 ntBASIC23.73■■□□□ 1.39
PDE6BP35913 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.73■■□□□ 1.39
PDE6BP35913 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.73■■□□□ 1.39
PDE6BP35913 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.73■■□□□ 1.39
PDE6BP35913 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PDE6BP35913 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PDE6BP35913 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.73■■□□□ 1.39
PDE6BP35913 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE6BP35913 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PDE6BP35913 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE6BP35913 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.72■■□□□ 1.39
PDE6BP35913 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE6BP35913 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDE6BP35913 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.72■■□□□ 1.39
PDE6BP35913 PVRIG2P-201ENST00000435460 978 ntBASIC23.72■■□□□ 1.39
PDE6BP35913 AP002383.4-201ENST00000442518 975 ntBASIC23.72■■□□□ 1.39
PDE6BP35913 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PDE6BP35913 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms