Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS4P35443 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
THBS4P35443 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS4P35443 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
THBS4P35443 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
THBS4P35443 AL135905.2-201ENST00000584934 1404 ntBASIC16.95■□□□□ 0.3
THBS4P35443 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS4P35443 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
THBS4P35443 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
THBS4P35443 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 AC012618.2-201ENST00000428058 849 ntBASIC16.94■□□□□ 0.3
THBS4P35443 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.94■□□□□ 0.3
THBS4P35443 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.94■□□□□ 0.3
THBS4P35443 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.94■□□□□ 0.3
THBS4P35443 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.94■□□□□ 0.3
THBS4P35443 AC233702.5-201ENST00000584107 538 ntBASIC16.94■□□□□ 0.3
THBS4P35443 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.94■□□□□ 0.3
THBS4P35443 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 AC098818.2-201ENST00000564925 2320 ntBASIC16.94■□□□□ 0.3
THBS4P35443 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
THBS4P35443 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 HTR7P1-201ENST00000538670 1336 ntBASIC16.94■□□□□ 0.3
THBS4P35443 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
THBS4P35443 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
THBS4P35443 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
THBS4P35443 AP000974.1-201ENST00000623909 2387 ntBASIC16.93■□□□□ 0.3
THBS4P35443 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
THBS4P35443 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS4P35443 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.93■□□□□ 0.3
THBS4P35443 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
THBS4P35443 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.93■□□□□ 0.3
THBS4P35443 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 AL032819.2-201ENST00000624543 2162 ntBASIC16.93■□□□□ 0.3
THBS4P35443 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS4P35443 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS4P35443 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS4P35443 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.92■□□□□ 0.3
THBS4P35443 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THBS4P35443 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
THBS4P35443 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
THBS4P35443 SNORA78-201ENST00000459373 127 ntBASIC16.92■□□□□ 0.3
THBS4P35443 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.92■□□□□ 0.3
THBS4P35443 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.92■□□□□ 0.3
THBS4P35443 AP001412.1-201ENST00000608405 714 ntBASIC16.92■□□□□ 0.3
THBS4P35443 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
THBS4P35443 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.92■□□□□ 0.3
THBS4P35443 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
THBS4P35443 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.92■□□□□ 0.3
THBS4P35443 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.92■□□□□ 0.3
THBS4P35443 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
THBS4P35443 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS4P35443 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS4P35443 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS4P35443 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms