Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.3■□□□□ 0.84
RFC1P35251 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC1P35251 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC1P35251 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.3■□□□□ 0.84
RFC1P35251 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC1P35251 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 TEX21P-204ENST00000641479 1693 ntBASIC20.29■□□□□ 0.84
RFC1P35251 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RFC1P35251 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.29■□□□□ 0.84
RFC1P35251 FAM201B-201ENST00000458407 597 ntBASIC20.29■□□□□ 0.84
RFC1P35251 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC1P35251 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC1P35251 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC1P35251 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFC1P35251 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
RFC1P35251 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.29■□□□□ 0.84
RFC1P35251 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RFC1P35251 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.28■□□□□ 0.84
RFC1P35251 KRT16P5-201ENST00000455284 522 ntBASIC20.28■□□□□ 0.84
RFC1P35251 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 C1QBPP2-201ENST00000528754 825 ntBASIC20.28■□□□□ 0.84
RFC1P35251 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.28■□□□□ 0.84
RFC1P35251 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.28■□□□□ 0.84
RFC1P35251 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 AC110285.5-201ENST00000611501 352 ntBASIC20.28■□□□□ 0.84
RFC1P35251 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 AC098818.2-201ENST00000564925 2320 ntBASIC20.28■□□□□ 0.84
RFC1P35251 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.28■□□□□ 0.84
RFC1P35251 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFC1P35251 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 AP000974.1-201ENST00000623909 2387 ntBASIC20.27■□□□□ 0.84
RFC1P35251 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.27■□□□□ 0.84
RFC1P35251 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.27■□□□□ 0.84
RFC1P35251 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.27■□□□□ 0.84
RFC1P35251 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.27■□□□□ 0.84
RFC1P35251 HLA-A-209ENST00000638375 975 ntBASIC20.27■□□□□ 0.84
RFC1P35251 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RFC1P35251 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RFC1P35251 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RFC1P35251 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
RFC1P35251 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
RFC1P35251 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFC1P35251 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFC1P35251 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFC1P35251 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RFC1P35251 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.27■□□□□ 0.83
RFC1P35251 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RFC1P35251 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFC1P35251 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.83
RFC1P35251 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC1P35251 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC1P35251 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFC1P35251 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms