Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CKS2P33552 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CKS2P33552 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CKS2P33552 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CKS2P33552 NOC2LP1-202ENST00000452600 2235 ntBASIC14.17□□□□□ -0.14
CKS2P33552 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L2-201ENST00000561772 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 AC027682.1-201ENST00000562846 899 ntBASIC14.17□□□□□ -0.14
CKS2P33552 TPRG1LP1-201ENST00000598702 760 ntBASIC14.17□□□□□ -0.14
CKS2P33552 AC243732.1-201ENST00000612648 864 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L6-201ENST00000626483 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L1-201ENST00000627662 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L8-201ENST00000629013 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L3-201ENST00000630187 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L7-201ENST00000630678 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 DUX4L5-201ENST00000630834 1275 ntBASIC14.17□□□□□ -0.14
CKS2P33552 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CKS2P33552 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 AC141586.3-201ENST00000562166 1838 ntBASIC14.17□□□□□ -0.14
CKS2P33552 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.17□□□□□ -0.14
CKS2P33552 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 PKD1P5-201ENST00000532415 10291 ntBASIC14.17□□□□□ -0.14
CKS2P33552 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CKS2P33552 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CKS2P33552 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CKS2P33552 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 AL354751.1-201ENST00000412768 1863 ntBASIC14.16□□□□□ -0.14
CKS2P33552 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 KRT8P20-201ENST00000423953 1409 ntBASIC14.16□□□□□ -0.14
CKS2P33552 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.16□□□□□ -0.14
CKS2P33552 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CKS2P33552 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.16□□□□□ -0.14
CKS2P33552 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.16□□□□□ -0.14
CKS2P33552 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 AC131281.2-201ENST00000520478 145 ntBASIC14.16□□□□□ -0.14
CKS2P33552 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.16□□□□□ -0.14
CKS2P33552 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 AL136162.1-201ENST00000607711 1078 ntBASIC14.16□□□□□ -0.14
CKS2P33552 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.16□□□□□ -0.14
CKS2P33552 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CKS2P33552 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.16□□□□□ -0.14
CKS2P33552 AL031598.1-201ENST00000561511 1773 ntBASIC14.16□□□□□ -0.14
CKS2P33552 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.16□□□□□ -0.14
CKS2P33552 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CKS2P33552 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CKS2P33552 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CKS2P33552 AC087633.2-202ENST00000565166 1439 ntBASIC14.15□□□□□ -0.14
CKS2P33552 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.15□□□□□ -0.14
CKS2P33552 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms