Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.34■□□□□ 0.69
LSP1P33241 AC090340.1-201ENST00000620778 4980 ntBASIC19.34■□□□□ 0.69
LSP1P33241 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 AC126763.1-201ENST00000552015 2118 ntBASIC19.33■□□□□ 0.69
LSP1P33241 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.33■□□□□ 0.69
LSP1P33241 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LSP1P33241 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.33■□□□□ 0.69
LSP1P33241 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.33■□□□□ 0.69
LSP1P33241 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.33■□□□□ 0.68
LSP1P33241 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 AL355001.2-201ENST00000620617 1191 ntBASIC19.33■□□□□ 0.68
LSP1P33241 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
LSP1P33241 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.33■□□□□ 0.68
LSP1P33241 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.33■□□□□ 0.68
LSP1P33241 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 RBM17P2-201ENST00000616397 1405 ntBASIC19.33■□□□□ 0.68
LSP1P33241 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.33■□□□□ 0.68
LSP1P33241 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
LSP1P33241 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LSP1P33241 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSP1P33241 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
LSP1P33241 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.32■□□□□ 0.68
LSP1P33241 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LSP1P33241 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LSP1P33241 AC096631.2-201ENST00000436136 790 ntBASIC19.32■□□□□ 0.68
LSP1P33241 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.32■□□□□ 0.68
LSP1P33241 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.32■□□□□ 0.68
LSP1P33241 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 AC079140.4-201ENST00000507448 529 ntBASIC19.32■□□□□ 0.68
LSP1P33241 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.32■□□□□ 0.68
LSP1P33241 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSP1P33241 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.32■□□□□ 0.68
LSP1P33241 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSP1P33241 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LSP1P33241 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 AC138932.1-201ENST00000534164 6830 ntBASIC19.31■□□□□ 0.68
LSP1P33241 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 PCDHA12-202ENST00000613593 2588 ntBASIC19.31■□□□□ 0.68
LSP1P33241 AC073592.3-201ENST00000625118 1834 ntBASIC19.31■□□□□ 0.68
LSP1P33241 AC097381.1-201ENST00000429019 1296 ntBASIC19.31■□□□□ 0.68
LSP1P33241 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.31■□□□□ 0.68
LSP1P33241 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LSP1P33241 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LSP1P33241 AIRN-201ENST00000601203 4374 ntBASIC19.31■□□□□ 0.68
LSP1P33241 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.31■□□□□ 0.68
LSP1P33241 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LSP1P33241 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.31■□□□□ 0.68
LSP1P33241 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSP1P33241 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.3■□□□□ 0.68
LSP1P33241 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms