Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPS1P31327 SMG8-203ENST00000578922 2178 ntBASIC27.29■■□□□ 1.96
CPS1P31327 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPS1P31327 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPS1P31327 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC27.29■■□□□ 1.96
CPS1P31327 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CPS1P31327 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPS1P31327 ILF2-202ENST00000368681 726 ntTSL 2 BASIC27.29■■□□□ 1.96
CPS1P31327 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC27.29■■□□□ 1.96
CPS1P31327 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.29■■□□□ 1.96
CPS1P31327 PNN-202ENST00000553331 656 ntTSL 3 BASIC27.29■■□□□ 1.96
CPS1P31327 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPS1P31327 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC27.29■■□□□ 1.96
CPS1P31327 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC27.28■■□□□ 1.96
CPS1P31327 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CPS1P31327 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC27.28■■□□□ 1.96
CPS1P31327 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC27.28■■□□□ 1.96
CPS1P31327 AF228730.7-201ENST00000641842 219 ntBASIC27.28■■□□□ 1.96
CPS1P31327 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC27.28■■□□□ 1.96
CPS1P31327 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CPS1P31327 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC27.28■■□□□ 1.96
CPS1P31327 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPS1P31327 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC27.27■■□□□ 1.96
CPS1P31327 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CPS1P31327 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC27.27■■□□□ 1.96
CPS1P31327 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC27.27■■□□□ 1.96
CPS1P31327 AL160286.2-201ENST00000567150 934 ntBASIC27.27■■□□□ 1.96
CPS1P31327 LINC01711-201ENST00000598340 967 ntBASIC27.27■■□□□ 1.96
CPS1P31327 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC27.27■■□□□ 1.96
CPS1P31327 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
CPS1P31327 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPS1P31327 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC27.27■■□□□ 1.96
CPS1P31327 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPS1P31327 FEM1AP1-201ENST00000431297 1995 ntBASIC27.27■■□□□ 1.96
CPS1P31327 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPS1P31327 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC27.27■■□□□ 1.96
CPS1P31327 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC27.26■■□□□ 1.96
CPS1P31327 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC27.26■■□□□ 1.96
CPS1P31327 AC092865.5-201ENST00000545435 363 ntBASIC27.26■■□□□ 1.96
CPS1P31327 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
CPS1P31327 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CPS1P31327 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC27.26■■□□□ 1.95
CPS1P31327 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CPS1P31327 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CPS1P31327 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CPS1P31327 KRT16P4-201ENST00000453883 522 ntBASIC27.26■■□□□ 1.95
CPS1P31327 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC27.26■■□□□ 1.95
CPS1P31327 FOSL1P1-201ENST00000511041 816 ntBASIC27.26■■□□□ 1.95
CPS1P31327 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC27.26■■□□□ 1.95
CPS1P31327 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CPS1P31327 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC27.25■■□□□ 1.95
CPS1P31327 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
CPS1P31327 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CPS1P31327 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CPS1P31327 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CPS1P31327 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.25■■□□□ 1.95
CPS1P31327 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CPS1P31327 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPS1P31327 AC026310.3-201ENST00000625186 2373 ntBASIC27.24■■□□□ 1.95
CPS1P31327 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.24■■□□□ 1.95
CPS1P31327 IL9RP2-201ENST00000423948 1312 ntBASIC27.24■■□□□ 1.95
CPS1P31327 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC27.24■■□□□ 1.95
CPS1P31327 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CPS1P31327 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CPS1P31327 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CPS1P31327 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC27.24■■□□□ 1.95
CPS1P31327 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CPS1P31327 RNA5SP419-201ENST00000515908 135 ntBASIC27.24■■□□□ 1.95
CPS1P31327 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.24■■□□□ 1.95
CPS1P31327 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC27.24■■□□□ 1.95
CPS1P31327 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.24■■□□□ 1.95
CPS1P31327 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC27.24■■□□□ 1.95
CPS1P31327 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CPS1P31327 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPS1P31327 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms