Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.91■□□□□ 0.62
VARSP26640 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.91■□□□□ 0.62
VARSP26640 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
VARSP26640 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
VARSP26640 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.91■□□□□ 0.62
VARSP26640 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.91■□□□□ 0.62
VARSP26640 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VARSP26640 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
VARSP26640 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARSP26640 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VARSP26640 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.9■□□□□ 0.62
VARSP26640 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
VARSP26640 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.9■□□□□ 0.62
VARSP26640 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.9■□□□□ 0.62
VARSP26640 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VARSP26640 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VARSP26640 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.9■□□□□ 0.62
VARSP26640 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VARSP26640 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARSP26640 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VARSP26640 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.89■□□□□ 0.62
VARSP26640 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VARSP26640 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VARSP26640 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VARSP26640 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.89■□□□□ 0.62
VARSP26640 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
VARSP26640 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.89■□□□□ 0.61
VARSP26640 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.89■□□□□ 0.61
VARSP26640 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 AC233263.1-201ENST00000578059 224 ntBASIC18.89■□□□□ 0.61
VARSP26640 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 AL121829.2-201ENST00000620908 328 ntBASIC18.89■□□□□ 0.61
VARSP26640 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.89■□□□□ 0.61
VARSP26640 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
VARSP26640 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.89■□□□□ 0.61
VARSP26640 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARSP26640 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.89■□□□□ 0.61
VARSP26640 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 C1QBPP2-201ENST00000528754 825 ntBASIC18.88■□□□□ 0.61
VARSP26640 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.88■□□□□ 0.61
VARSP26640 RN7SL471P-201ENST00000580476 299 ntBASIC18.88■□□□□ 0.61
VARSP26640 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 AP006587.1-201ENST00000534129 1502 ntBASIC18.88■□□□□ 0.61
VARSP26640 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VARSP26640 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.88■□□□□ 0.61
VARSP26640 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.88■□□□□ 0.61
VARSP26640 NEFHP1-201ENST00000412845 2629 ntBASIC18.87■□□□□ 0.61
VARSP26640 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms