Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.24■□□□□ 0.83
PDGFRAP16234 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDGFRAP16234 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.23■□□□□ 0.83
PDGFRAP16234 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.23■□□□□ 0.83
PDGFRAP16234 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.23■□□□□ 0.83
PDGFRAP16234 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.23■□□□□ 0.83
PDGFRAP16234 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.23■□□□□ 0.83
PDGFRAP16234 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.23■□□□□ 0.83
PDGFRAP16234 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDGFRAP16234 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDGFRAP16234 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.22■□□□□ 0.83
PDGFRAP16234 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
PDGFRAP16234 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFRAP16234 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFRAP16234 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.22■□□□□ 0.83
PDGFRAP16234 MIR718-201ENST00000390190 70 ntBASIC20.22■□□□□ 0.83
PDGFRAP16234 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFRAP16234 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.22■□□□□ 0.83
PDGFRAP16234 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFRAP16234 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDGFRAP16234 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.22■□□□□ 0.83
PDGFRAP16234 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.22■□□□□ 0.83
PDGFRAP16234 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFRAP16234 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.22■□□□□ 0.83
PDGFRAP16234 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.22■□□□□ 0.83
PDGFRAP16234 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.22■□□□□ 0.83
PDGFRAP16234 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PDGFRAP16234 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFRAP16234 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFRAP16234 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFRAP16234 HTR7P1-201ENST00000538670 1336 ntBASIC20.21■□□□□ 0.83
PDGFRAP16234 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFRAP16234 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFRAP16234 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFRAP16234 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDGFRAP16234 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 AL596275.1-201ENST00000423464 877 ntBASIC20.2■□□□□ 0.82
PDGFRAP16234 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.2■□□□□ 0.82
PDGFRAP16234 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.2■□□□□ 0.82
PDGFRAP16234 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.2■□□□□ 0.82
PDGFRAP16234 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDGFRAP16234 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFRAP16234 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFRAP16234 TEX21P-204ENST00000641479 1693 ntBASIC20.19■□□□□ 0.82
PDGFRAP16234 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.19■□□□□ 0.82
PDGFRAP16234 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.19■□□□□ 0.82
PDGFRAP16234 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFRAP16234 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFRAP16234 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms