Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 AC063952.2-201ENST00000498792 1227 ntBASIC18.89■□□□□ 0.61
HOXB3P14651 FITM1-202ENST00000559294 800 ntBASIC18.89■□□□□ 0.61
HOXB3P14651 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXB3P14651 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXB3P14651 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXB3P14651 AL445675.2-201ENST00000620291 557 ntBASIC18.89■□□□□ 0.61
HOXB3P14651 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXB3P14651 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXB3P14651 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXB3P14651 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXB3P14651 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXB3P14651 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXB3P14651 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXB3P14651 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXB3P14651 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HOXB3P14651 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HOXB3P14651 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXB3P14651 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXB3P14651 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXB3P14651 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXB3P14651 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.88■□□□□ 0.61
HOXB3P14651 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXB3P14651 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXB3P14651 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXB3P14651 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXB3P14651 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HOXB3P14651 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.87■□□□□ 0.61
HOXB3P14651 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXB3P14651 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXB3P14651 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXB3P14651 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXB3P14651 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXB3P14651 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXB3P14651 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.87■□□□□ 0.61
HOXB3P14651 AC125437.2-201ENST00000625180 2167 ntBASIC18.87■□□□□ 0.61
HOXB3P14651 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXB3P14651 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXB3P14651 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXB3P14651 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXB3P14651 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXB3P14651 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 ATP5G1P1-201ENST00000448724 379 ntBASIC18.86■□□□□ 0.61
HOXB3P14651 AC011506.1-201ENST00000474329 610 ntBASIC18.86■□□□□ 0.61
HOXB3P14651 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXB3P14651 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.86■□□□□ 0.61
HOXB3P14651 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 AC022726.2-201ENST00000634673 547 ntBASIC18.86■□□□□ 0.61
HOXB3P14651 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HOXB3P14651 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HOXB3P14651 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXB3P14651 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXB3P14651 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXB3P14651 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXB3P14651 AP001271.2-201ENST00000624018 1556 ntBASIC18.85■□□□□ 0.61
HOXB3P14651 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HOXB3P14651 FSCN1P1-201ENST00000568912 1481 ntBASIC18.85■□□□□ 0.61
HOXB3P14651 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HOXB3P14651 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 AC004980.1-204ENST00000429707 299 ntBASIC18.85■□□□□ 0.61
HOXB3P14651 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms