Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CFTRP13569 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CFTRP13569 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
CFTRP13569 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
CFTRP13569 AC012615.1-201ENST00000565797 1299 ntBASIC33.12■■■□□ 2.89
CFTRP13569 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC33.12■■■□□ 2.89
CFTRP13569 SPEG-225ENST00000617028 815 ntTSL 5 BASIC33.12■■■□□ 2.89
CFTRP13569 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC33.11■■■□□ 2.89
CFTRP13569 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC33.11■■■□□ 2.89
CFTRP13569 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
CFTRP13569 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC33.11■■■□□ 2.89
CFTRP13569 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 MIR662-201ENST00000384847 95 ntBASIC33.11■■■□□ 2.89
CFTRP13569 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC33.11■■■□□ 2.89
CFTRP13569 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC33.11■■■□□ 2.89
CFTRP13569 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CFTRP13569 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CFTRP13569 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC33.1■■■□□ 2.89
CFTRP13569 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
CFTRP13569 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC33.1■■■□□ 2.89
CFTRP13569 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC33.1■■■□□ 2.89
CFTRP13569 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC33.1■■■□□ 2.89
CFTRP13569 AC024243.1-201ENST00000609234 778 ntBASIC33.1■■■□□ 2.89
CFTRP13569 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
CFTRP13569 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC33.1■■■□□ 2.89
CFTRP13569 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CFTRP13569 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CFTRP13569 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC33.1■■■□□ 2.89
CFTRP13569 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC33.09■■■□□ 2.89
CFTRP13569 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
CFTRP13569 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC33.09■■■□□ 2.89
CFTRP13569 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC33.09■■■□□ 2.89
CFTRP13569 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC33.09■■■□□ 2.89
CFTRP13569 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFTRP13569 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
CFTRP13569 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CFTRP13569 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
CFTRP13569 IL11-204ENST00000590625 1028 ntTSL 2 BASIC33.08■■■□□ 2.89
CFTRP13569 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CFTRP13569 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC33.08■■■□□ 2.89
CFTRP13569 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CFTRP13569 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC33.07■■■□□ 2.88
CFTRP13569 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC33.07■■■□□ 2.88
CFTRP13569 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC33.07■■■□□ 2.88
CFTRP13569 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
CFTRP13569 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC33.07■■■□□ 2.88
CFTRP13569 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CFTRP13569 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC33.07■■■□□ 2.88
CFTRP13569 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 MRPL3P1-201ENST00000400109 1033 ntBASIC33.06■■■□□ 2.88
CFTRP13569 KRT18P31-201ENST00000506277 1292 ntBASIC33.06■■■□□ 2.88
CFTRP13569 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 RNF126P1-202ENST00000569893 925 ntBASIC33.06■■■□□ 2.88
CFTRP13569 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC33.06■■■□□ 2.88
CFTRP13569 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CFTRP13569 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC33.05■■■□□ 2.88
CFTRP13569 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC33.05■■■□□ 2.88
CFTRP13569 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CFTRP13569 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC33.05■■■□□ 2.88
CFTRP13569 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFTRP13569 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC33.05■■■□□ 2.88
CFTRP13569 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFTRP13569 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC33.05■■■□□ 2.88
CFTRP13569 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC33.05■■■□□ 2.88
CFTRP13569 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFTRP13569 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC33.05■■■□□ 2.88
CFTRP13569 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
CFTRP13569 AL136038.4-201ENST00000603606 1261 ntBASIC33.05■■■□□ 2.88
CFTRP13569 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC33.05■■■□□ 2.88
CFTRP13569 AC009237.14-201ENST00000609975 1594 ntBASIC33.04■■■□□ 2.88
CFTRP13569 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC33.04■■■□□ 2.88
CFTRP13569 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC33.04■■■□□ 2.88
CFTRP13569 AL157888.1-201ENST00000631930 593 ntBASIC33.04■■■□□ 2.88
CFTRP13569 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFTRP13569 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
CFTRP13569 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC33.03■■■□□ 2.88
CFTRP13569 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC33.03■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms