Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.78■□□□□ 0.6
CDH1P12830 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH1P12830 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH1P12830 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH1P12830 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH1P12830 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDH1P12830 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDH1P12830 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH1P12830 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH1P12830 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH1P12830 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDH1P12830 AC110285.5-201ENST00000611501 352 ntBASIC18.77■□□□□ 0.6
CDH1P12830 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDH1P12830 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH1P12830 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDH1P12830 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH1P12830 AC093503.3-201ENST00000624917 2352 ntBASIC18.77■□□□□ 0.6
CDH1P12830 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CDH1P12830 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.77■□□□□ 0.59
CDH1P12830 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH1P12830 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDH1P12830 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CDH1P12830 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH1P12830 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDH1P12830 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CDH1P12830 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH1P12830 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH1P12830 AC026471.1-201ENST00000564629 3026 ntBASIC18.76■□□□□ 0.59
CDH1P12830 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CDH1P12830 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH1P12830 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH1P12830 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH1P12830 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CDH1P12830 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDH1P12830 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH1P12830 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH1P12830 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH1P12830 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH1P12830 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH1P12830 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH1P12830 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH1P12830 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH1P12830 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH1P12830 AC098590.1-201ENST00000468126 897 ntBASIC18.75■□□□□ 0.59
CDH1P12830 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH1P12830 AL359736.2-201ENST00000621992 437 ntBASIC18.75■□□□□ 0.59
CDH1P12830 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CDH1P12830 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH1P12830 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.74■□□□□ 0.59
CDH1P12830 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms