Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCNAP12004 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.75■□□□□ 0.59
PCNAP12004 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.75■□□□□ 0.59
PCNAP12004 PRKY-204ENST00000533551 1019 ntBASIC18.75■□□□□ 0.59
PCNAP12004 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 AC008403.3-201ENST00000598924 454 ntBASIC18.75■□□□□ 0.59
PCNAP12004 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.75■□□□□ 0.59
PCNAP12004 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.75■□□□□ 0.59
PCNAP12004 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCNAP12004 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNAP12004 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNAP12004 Z82202.1-201ENST00000623446 1880 ntBASIC18.75■□□□□ 0.59
PCNAP12004 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNAP12004 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCNAP12004 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PCNAP12004 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNAP12004 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.74■□□□□ 0.59
PCNAP12004 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNAP12004 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.74■□□□□ 0.59
PCNAP12004 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.74■□□□□ 0.59
PCNAP12004 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCNAP12004 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCNAP12004 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCNAP12004 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCNAP12004 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCNAP12004 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.73■□□□□ 0.59
PCNAP12004 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.73■□□□□ 0.59
PCNAP12004 KRT17P3-201ENST00000420566 1262 ntBASIC18.73■□□□□ 0.59
PCNAP12004 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PCNAP12004 AC026366.1-201ENST00000488803 879 ntBASIC18.73■□□□□ 0.59
PCNAP12004 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.73■□□□□ 0.59
PCNAP12004 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCNAP12004 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCNAP12004 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCNAP12004 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCNAP12004 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.72■□□□□ 0.59
PCNAP12004 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.72■□□□□ 0.59
PCNAP12004 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCNAP12004 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms