Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.3■□□□□ 0.68
THRAP10827 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.3■□□□□ 0.68
THRAP10827 RARRES2P10-201ENST00000564312 460 ntBASIC19.3■□□□□ 0.68
THRAP10827 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.3■□□□□ 0.68
THRAP10827 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.3■□□□□ 0.68
THRAP10827 AP001412.1-201ENST00000608405 714 ntBASIC19.3■□□□□ 0.68
THRAP10827 AL121829.2-201ENST00000620908 328 ntBASIC19.3■□□□□ 0.68
THRAP10827 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.3■□□□□ 0.68
THRAP10827 AL049637.2-201ENST00000641778 930 ntBASIC19.3■□□□□ 0.68
THRAP10827 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
THRAP10827 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.3■□□□□ 0.68
THRAP10827 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
THRAP10827 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
THRAP10827 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
THRAP10827 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.29■□□□□ 0.68
THRAP10827 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.29■□□□□ 0.68
THRAP10827 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
THRAP10827 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
THRAP10827 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
THRAP10827 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.29■□□□□ 0.68
THRAP10827 LETM1P2-201ENST00000597330 2178 ntBASIC19.29■□□□□ 0.68
THRAP10827 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THRAP10827 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.28■□□□□ 0.68
THRAP10827 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 TSPY7P-201ENST00000431358 1114 ntBASIC19.28■□□□□ 0.68
THRAP10827 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.28■□□□□ 0.68
THRAP10827 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.28■□□□□ 0.68
THRAP10827 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.28■□□□□ 0.68
THRAP10827 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
THRAP10827 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.28■□□□□ 0.68
THRAP10827 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.28■□□□□ 0.68
THRAP10827 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
THRAP10827 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.28■□□□□ 0.68
THRAP10827 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
THRAP10827 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
THRAP10827 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
THRAP10827 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.27■□□□□ 0.68
THRAP10827 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THRAP10827 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
THRAP10827 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THRAP10827 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
THRAP10827 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
THRAP10827 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
THRAP10827 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
THRAP10827 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms