Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.07■□□□□ 0.32
ERCC1P07992 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERCC1P07992 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERCC1P07992 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ERCC1P07992 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.06■□□□□ 0.32
ERCC1P07992 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ERCC1P07992 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC1P07992 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC1P07992 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ERCC1P07992 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
ERCC1P07992 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERCC1P07992 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ERCC1P07992 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ERCC1P07992 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ERCC1P07992 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC1P07992 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC1P07992 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 AC008550.1-201ENST00000511500 884 ntBASIC17.05■□□□□ 0.32
ERCC1P07992 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC1P07992 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC1P07992 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.05■□□□□ 0.32
ERCC1P07992 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.05■□□□□ 0.32
ERCC1P07992 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC1P07992 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ERCC1P07992 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 PHGDH-210ENST00000641115 1638 ntBASIC17.04■□□□□ 0.32
ERCC1P07992 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ERCC1P07992 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ERCC1P07992 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.04■□□□□ 0.32
ERCC1P07992 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.04■□□□□ 0.32
ERCC1P07992 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.04■□□□□ 0.32
ERCC1P07992 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 AP001412.1-201ENST00000608405 714 ntBASIC17.04■□□□□ 0.32
ERCC1P07992 AL121906.2-201ENST00000621597 723 ntBASIC17.04■□□□□ 0.32
ERCC1P07992 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ERCC1P07992 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms