Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPNS1P04632 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CAPNS1P04632 KRT18P48-201ENST00000434763 852 ntBASIC19.17■□□□□ 0.66
CAPNS1P04632 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPNS1P04632 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.17■□□□□ 0.66
CAPNS1P04632 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPNS1P04632 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.17■□□□□ 0.66
CAPNS1P04632 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 NBPF21P-201ENST00000425093 1451 ntBASIC19.16■□□□□ 0.66
CAPNS1P04632 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPNS1P04632 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPNS1P04632 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CAPNS1P04632 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 DUSP5P1-201ENST00000441325 1139 ntBASIC19.16■□□□□ 0.66
CAPNS1P04632 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.16■□□□□ 0.66
CAPNS1P04632 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 AC063952.2-201ENST00000498792 1227 ntBASIC19.16■□□□□ 0.66
CAPNS1P04632 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 AC093503.3-201ENST00000624917 2352 ntBASIC19.16■□□□□ 0.66
CAPNS1P04632 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CAPNS1P04632 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.16■□□□□ 0.66
CAPNS1P04632 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CAPNS1P04632 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CAPNS1P04632 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPNS1P04632 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPNS1P04632 AC009947.2-201ENST00000444014 672 ntBASIC19.15■□□□□ 0.66
CAPNS1P04632 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPNS1P04632 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.15■□□□□ 0.66
CAPNS1P04632 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPNS1P04632 AC026471.1-201ENST00000564629 3026 ntBASIC19.15■□□□□ 0.66
CAPNS1P04632 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPNS1P04632 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPNS1P04632 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CAPNS1P04632 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPNS1P04632 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPNS1P04632 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPNS1P04632 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPNS1P04632 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CAPNS1P04632 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CAPNS1P04632 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPNS1P04632 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.14■□□□□ 0.65
CAPNS1P04632 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CAPNS1P04632 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPNS1P04632 AC093484.2-201ENST00000580996 2166 ntBASIC19.14■□□□□ 0.65
CAPNS1P04632 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CAPNS1P04632 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CAPNS1P04632 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPNS1P04632 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CAPNS1P04632 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPNS1P04632 NEFHP1-201ENST00000412845 2629 ntBASIC19.13■□□□□ 0.65
CAPNS1P04632 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CAPNS1P04632 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms