Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 HLA-F-220ENST00000434407 884 ntBASIC22.02■■□□□ 1.12
ALDH1A1P00352 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ALDH1A1P00352 MIR662-201ENST00000384847 95 ntBASIC22.01■■□□□ 1.11
ALDH1A1P00352 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ALDH1A1P00352 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ALDH1A1P00352 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ALDH1A1P00352 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.01■■□□□ 1.11
ALDH1A1P00352 BID-203ENST00000399765 1879 ntTSL 2 BASIC22■■□□□ 1.11
ALDH1A1P00352 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ALDH1A1P00352 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22■■□□□ 1.11
ALDH1A1P00352 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22■■□□□ 1.11
ALDH1A1P00352 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22■■□□□ 1.11
ALDH1A1P00352 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 KRT18P13-201ENST00000400056 1290 ntBASIC22■■□□□ 1.11
ALDH1A1P00352 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 PMS2P1-201ENST00000431037 1228 ntBASIC22■■□□□ 1.11
ALDH1A1P00352 GRAMD4P1-201ENST00000435181 1110 ntBASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
ALDH1A1P00352 AC120114.3-201ENST00000611923 658 ntBASIC22■■□□□ 1.11
ALDH1A1P00352 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ALDH1A1P00352 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22■■□□□ 1.11
ALDH1A1P00352 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ALDH1A1P00352 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ALDH1A1P00352 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 TOB2P1-201ENST00000469761 992 ntBASIC21.98■■□□□ 1.11
ALDH1A1P00352 AL671883.3-201ENST00000603274 991 ntBASIC21.98■■□□□ 1.11
ALDH1A1P00352 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ALDH1A1P00352 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.98■■□□□ 1.11
ALDH1A1P00352 FEM1AP4-201ENST00000443167 1987 ntBASIC21.98■■□□□ 1.11
ALDH1A1P00352 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms