Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC128676.1-201ENST00000454392 318 ntBASIC19.21■□□□□ 0.67
NDUFS3O75489 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
NDUFS3O75489 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NDUFS3O75489 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.21■□□□□ 0.67
NDUFS3O75489 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 AC087289.5-201ENST00000586076 3175 ntBASIC19.21■□□□□ 0.67
NDUFS3O75489 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
NDUFS3O75489 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NDUFS3O75489 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.2■□□□□ 0.66
NDUFS3O75489 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFS3O75489 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFS3O75489 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFS3O75489 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 AC018445.3-201ENST00000624177 1945 ntBASIC19.2■□□□□ 0.66
NDUFS3O75489 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFS3O75489 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 SDHAP1-207ENST00000440850 2000 ntBASIC19.2■□□□□ 0.66
NDUFS3O75489 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.2■□□□□ 0.66
NDUFS3O75489 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NDUFS3O75489 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFS3O75489 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NDUFS3O75489 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDUFS3O75489 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.19■□□□□ 0.66
NDUFS3O75489 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS3O75489 FAM201B-201ENST00000458407 597 ntBASIC19.19■□□□□ 0.66
NDUFS3O75489 AC124016.1-201ENST00000609552 612 ntBASIC19.19■□□□□ 0.66
NDUFS3O75489 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS3O75489 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS3O75489 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS3O75489 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS3O75489 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS3O75489 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS3O75489 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
NDUFS3O75489 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.18■□□□□ 0.66
NDUFS3O75489 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.18■□□□□ 0.66
NDUFS3O75489 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS3O75489 KRT16P5-201ENST00000455284 522 ntBASIC19.18■□□□□ 0.66
NDUFS3O75489 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS3O75489 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS3O75489 C1QL1P1-201ENST00000568105 661 ntBASIC19.18■□□□□ 0.66
NDUFS3O75489 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NDUFS3O75489 AC110285.5-201ENST00000611501 352 ntBASIC19.18■□□□□ 0.66
NDUFS3O75489 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NDUFS3O75489 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NDUFS3O75489 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms