Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE3O75131 TMPOP1-202ENST00000424642 1267 ntBASIC18.48■□□□□ 0.55
CPNE3O75131 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.48■□□□□ 0.55
CPNE3O75131 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.48■□□□□ 0.55
CPNE3O75131 AP005242.2-201ENST00000580065 1175 ntBASIC18.48■□□□□ 0.55
CPNE3O75131 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE3O75131 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 HLA-A-209ENST00000638375 975 ntBASIC18.48■□□□□ 0.55
CPNE3O75131 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 KRT8P8-201ENST00000434750 1448 ntBASIC18.48■□□□□ 0.55
CPNE3O75131 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.48■□□□□ 0.55
CPNE3O75131 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE3O75131 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CPNE3O75131 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 CYP2D8P-201ENST00000433633 1490 ntBASIC18.47■□□□□ 0.55
CPNE3O75131 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE3O75131 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPNE3O75131 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
CPNE3O75131 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CPNE3O75131 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE3O75131 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE3O75131 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE3O75131 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE3O75131 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE3O75131 C2orf69P3-201ENST00000565542 1120 ntBASIC18.47■□□□□ 0.55
CPNE3O75131 AC010947.1-201ENST00000623454 693 ntBASIC18.47■□□□□ 0.55
CPNE3O75131 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CPNE3O75131 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE3O75131 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.47■□□□□ 0.55
CPNE3O75131 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPNE3O75131 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE3O75131 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE3O75131 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CPNE3O75131 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 AC011506.1-201ENST00000474329 610 ntBASIC18.46■□□□□ 0.55
CPNE3O75131 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE3O75131 RN7SL850P-201ENST00000579959 291 ntBASIC18.46■□□□□ 0.55
CPNE3O75131 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CPNE3O75131 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE3O75131 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE3O75131 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE3O75131 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
CPNE3O75131 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CPNE3O75131 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPNE3O75131 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.45■□□□□ 0.54
CPNE3O75131 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPNE3O75131 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CPNE3O75131 AC113347.1-201ENST00000413321 391 ntBASIC18.45■□□□□ 0.54
CPNE3O75131 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.45■□□□□ 0.54
CPNE3O75131 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CPNE3O75131 AC097488.1-201ENST00000507834 756 ntBASIC18.45■□□□□ 0.54
CPNE3O75131 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms