Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX4O60224 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSX4O60224 AC092368.3-202ENST00000574180 1591 ntBASIC17.42■□□□□ 0.38
SSX4O60224 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SSX4O60224 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX4O60224 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.42■□□□□ 0.38
SSX4O60224 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SSX4O60224 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.42■□□□□ 0.38
SSX4O60224 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.42■□□□□ 0.38
SSX4O60224 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SSX4O60224 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 CROCCP3-202ENST00000420820 1947 ntBASIC17.42■□□□□ 0.38
SSX4O60224 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.42■□□□□ 0.38
SSX4O60224 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SSX4O60224 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSX4O60224 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSX4O60224 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.41■□□□□ 0.38
SSX4O60224 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SSX4O60224 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.41■□□□□ 0.38
SSX4O60224 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.41■□□□□ 0.38
SSX4O60224 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.41■□□□□ 0.38
SSX4O60224 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX4O60224 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX4O60224 PNMA6B-201ENST00000538162 1200 ntBASIC17.41■□□□□ 0.38
SSX4O60224 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX4O60224 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSX4O60224 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX4O60224 AC008403.3-201ENST00000598924 454 ntBASIC17.41■□□□□ 0.38
SSX4O60224 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSX4O60224 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX4O60224 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSX4O60224 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 AC135050.7-201ENST00000624508 2218 ntBASIC17.4■□□□□ 0.38
SSX4O60224 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SSX4O60224 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX4O60224 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 FAM197Y4-202ENST00000622692 608 ntBASIC17.4■□□□□ 0.38
SSX4O60224 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 LINC01465-201ENST00000408887 1940 ntBASIC17.4■□□□□ 0.38
SSX4O60224 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX4O60224 AC011484.1-201ENST00000377652 1995 ntBASIC17.4■□□□□ 0.38
SSX4O60224 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX4O60224 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX4O60224 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSX4O60224 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.39■□□□□ 0.38
SSX4O60224 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SSX4O60224 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSX4O60224 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SSX4O60224 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX4O60224 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX4O60224 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX4O60224 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSX4O60224 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX4O60224 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX4O60224 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX4O60224 KRT17P3-201ENST00000420566 1262 ntBASIC17.39■□□□□ 0.37
SSX4O60224 AL596275.1-201ENST00000423464 877 ntBASIC17.39■□□□□ 0.37
SSX4O60224 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms